hdac4 inhibitor lmk 235 (MedChemExpress)
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Hdac4 Inhibitor Lmk 235, supplied by MedChemExpress, used in various techniques. Bioz Stars score: 94/100, based on 33 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Average 94 stars, based on 33 article reviews
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1) Product Images from "Targeting the NAT10-HDAC4 positive feedback loop counteracts immunosuppression in breast cancer"
Article Title: Targeting the NAT10-HDAC4 positive feedback loop counteracts immunosuppression in breast cancer
Journal: Journal of Experimental & Clinical Cancer Research : CR
doi: 10.1186/s13046-025-03638-7
Figure Legend Snippet: NAT10 stimulates HDAC4 expression via ac4C modification. A Volcano plot of differentially expressed ac4C acetylation peaks ( P < 0.05) identified by acRIP-seq in NAT10 knockdown cells. B Distribution of ac4C peaks across mRNA regions in breast cancer cells. C Sequence logo of the enriched motif within ac4C peaks identified by HOMER. D Volcano plot of differentially expressed mRNAs ( P < 0.05) identified by RNA-seq in NAT10 knockdown cells. E Integrative analysis of acRIP-seq and RNA-seq data to identify potential downstream targets of NAT10. F , G Relative HDAC4 mRNA expression measured by qRT-PCR after NAT10 knockdown. H , I acRIP-qPCR analysis of ac4C modification ( H ) and RIP-qPCR analysis of NAT10 binding on HDAC4 mRNA ( I ) after NAT10 knockdown. J Genome browser view of ac4C peaks on HDAC4 mRNA from acRIP-seq. K Relative HDAC4 protein levels measured by Western blot after NAT10 knockdown. L qRT-PCR analysis of HDAC4 mRNA stability after actinomycin D treatment in NAT10 knockdown cells. M Luciferase activity of the reporter constructs containing the wild-type or ac4C site mutated sequence in NAT10 knockdown cells. N , O HDAC4 expression assessed by qRT-PCR ( N ) and Western blot ( O ) after transfection with oeNAT10 or NAT10 G641E mutant plasmid. P qRT-PCR analysis of HDAC4 mRNA stability after actinomycin D treatment in cells transfected with oeNAT10 or NAT10 G641E . Q , R acRIP-qPCR analysis of ac4C modification ( Q ) and RIP-qPCR analysis of NAT10 binding on HDAC4 mRNA ( R ) after transfection with oeNAT10 or NAT10 G641E . S Luciferase activity of the reporter constructs containing the wild-type or ac4C site mutated sequence after transfection with oeNAT10 or NAT10 G641E . All data are presented as mean ± SD. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001
Techniques Used: Expressing, Modification, Knockdown, Sequencing, RNA Sequencing, Quantitative RT-PCR, Binding Assay, Western Blot, Luciferase, Activity Assay, Construct, Transfection, Mutagenesis, Plasmid Preparation
Figure Legend Snippet: HDAC4 acts as a deacetylase to regulate NAT10 stability. A Representative IHC images and quantification of NAT10 and HDAC4 expression in breast cancer tissues ( n = 220; scale bar, 200 µm). B , C Correlation between NAT10 and HDAC4 expression levels in breast cancer tissues, as analyzed by IHC ( B ) and in the TCGA-BRCA RNA-seq dataset ( C) . D , E Relative NAT10 expression was detected by Western blot ( D ) and qRT-PCR ( E ) after HDAC4 knockdown or overexpression. F Western blot analysis of NAT10 protein stability after cycloheximide treatment in cells with HDAC4 knockdown or overexpression. G Molecular docking model of the NAT10 (blue) and HDAC4 (yellow) interaction, with an enlarged view highlighting predicted hydrogen bonds. H Co-IP followed by Western blot analysis was used to detect the interaction between endogenous HDAC4 and NAT10. I Co-IP followed by Western blot analysis assessed NAT10 acetylation levels after HDAC4 knockdown or overexpression. J Prediction of potential deacetylation sites on NAT10 using MusiteDeep. K The predicted acetylation sites on NAT10 were individually mutated (K→R), and the effects of HDAC4 on the acetylation levels of the six NAT10 mutants were examined in 293T cells. L Detection of NAT10 acetylation in cells expressing NAT10 K354R following transfection with vector or HDAC4. M Detection of NAT10 acetylation in cells transfected with wild-type or catalytically inactive (D840N) HDAC4. N Western blot analysis of NAT10 protein stability following cycloheximide treatment in cells transfected with siNC, siHDAC4, or siHDAC4 plus NAT10 K354R . All data are presented as mean ± SD. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001
Techniques Used: Histone Deacetylase Assay, Expressing, RNA Sequencing, Western Blot, Quantitative RT-PCR, Knockdown, Over Expression, Co-Immunoprecipitation Assay, Transfection, Plasmid Preparation
Figure Legend Snippet: The proliferative function of NAT10 in breast cancer depends on HDAC4. A CCK-8 assays of cells transfected with vector, oeNAT10, oeNAT10 plus siHDAC4-1, or oeNAT10 plus siHDAC4-2. B Flow cytometry analysis of apoptotic rates (LR + UR) in cells transfected with the indicated constructs. C Flow cytometry analysis of cell cycle distribution in cells transfected with the indicated constructs. D Representative images of tumors in mice treated with vector, oeNAT10, oeNAT10 plus LMK235 (5 mg/kg), or oeNAT10 plus LMK235 (10 mg/kg) ( n = 6). E Tumor growth curves and tumor weight analysis in tumors from different groups ( n = 6). F Representative IHC images of NAT10, HDAC4, and Ki67 in tumor tissues from different treatment groups, with quantification of staining intensity ( n = 6; scale bars, 50 μm). G Representative TUNEL staining of tumor tissues from different treatment groups, with quantification of staining intensity ( n = 6; scale bars, 100 px). H-J CCK-8 assays ( H ) and flow cytometry analyses of apoptotic rates ( I ) and cell cycle distribution ( J ) in cells transfected with vector, oeNAT10, oeNAT10 plus LMK235 (1 µM), or oeNAT10 plus LMK235 (2 µM). All data are presented as mean ± SD. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001
Techniques Used: CCK-8 Assay, Transfection, Plasmid Preparation, Flow Cytometry, Construct, Staining, TUNEL Assay
Figure Legend Snippet: NAT10 promotes PD-L1 expression through HDAC4. A Relative PD-L1 expression assessed by Western blot and qRT–PCR following NAT10 knockdown or overexpression. B IF staining of PD-L1 in cells with NAT10 knockdown or overexpression (scale bars, 5 μm). C Representative IHC images of PD-L1 in tumor tissues from shNC or shNAT10 groups and vector or oeNAT10 groups, with quantification of staining intensity ( n = 6; scale bars, 50 μm). D-F Relative PD-L1 expression analyzed by Western blot ( D ), qRT-PCR ( D ), and IF ( E-F ) in cells transfected with vector, oeNAT10, oeNAT10 plus siHDAC4-1, or oeNAT10 plus siHDAC4-2. G Representative IHC images of PD-L1 in tumor tissues from vector, oeNAT10, oeNAT10 plus LMK235 (5 mg/kg), or oeNAT10 plus LMK235 (10 mg/kg), with quantification of staining intensity ( n = 6; scale bars, 50 μm) All data are presented as mean ± SD. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001
Techniques Used: Expressing, Western Blot, Quantitative RT-PCR, Knockdown, Over Expression, Staining, Plasmid Preparation, Transfection
Figure Legend Snippet: NAT10 promotes PD-L1 expression through the HDAC4–NF-κB pathway. A GSEA of RNA-seq (siHDAC4 vs. siNC) data showed enrichment of the NF-κB signaling pathway (NES, normalized enrichment score; P value by permutation test). B Correlation analysis of p65, NAT10, HDAC4, and PD-L1 mRNA expression in the TCGA RNA-seq dataset. C Relative PD-L1 expression assessed by qRT-PCR following HDAC4 knockdown or overexpression. D Western blot analysis of PD-L1 and NF-κB pathway proteins upon HDAC4 knockdown or overexpression. E Predicted p65 binding sites in the PD-L1 promoter identified using the JASPAR database. F ChIP-qPCR analysis of p65 enrichment at the PD-L1 promoter after HDAC4 knockdown or overexpression. G Western blot analysis of NF-κB pathway proteins in cells transfected with vector, oeNAT10, oeNAT10 plus siHDAC4-1, or oeNAT10 plus siHDAC4-2. All data are presented as mean ± SD. * P < 0.05, ** P < 0.01, *** P < 0.001, **** P < 0.0001
Techniques Used: Expressing, RNA Sequencing, Quantitative RT-PCR, Knockdown, Over Expression, Western Blot, Binding Assay, ChIP-qPCR, Transfection, Plasmid Preparation
Figure Legend Snippet: Mode pattern of the NAT10/HDAC4/NF-κB regulatory network in breast cancer. NAT10 mediated ac4C modification stabilizes HDAC4 mRNA, while HDAC4 stabilizes NAT10 protein, forming a reciprocal regulatory loop. HDAC4 activates NF-κB signaling, leading to PD-L1 upregulation and immune evasion. Inhibition of the NAT10/HDAC4/NF-κB axis reduces PD-L1 expression and restores antitumor immunity in breast cancer
Techniques Used: Modification, Inhibition, Expressing


